BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017F02SP1|AL427183
(970 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1512 1332 0.0
>3x_Contig1512
Length = 8803
Score = 1332 bits (670), Expect = 0.0
Identities = 679/685 (99%)
Strand = Plus / Plus
Query: 1 atcatgaacttgtttgctaattgttttcaccaatcttttgacaccatcaacttttaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8119 atcatgaacttgtttgctaattgttttcaccaatcttttgacaccatcaacttttaaact 8178
Query: 61 tgttcccatgatcaaaaacaaatcaggtttccctctgttgatatccatgttcaatccctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8179 tgttcccatgatcaaaaacaaatcaggtttccctctgttgatatccatgttcaatccctg 8238
Query: 121 tgtaataaaatctgcgtttgggtggttctcgccgtaaagaactatgtkaggacgtagcat 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 8239 tgtaataaaatctgcgtttgggtggttctcgccgtaaagaactatgttaggacgtagcat 8298
Query: 181 acccgaatgacccaaacatcttttaccctcgatagatcttctgttattcttttcgagaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8299 acccgaatgacccaaacatcttttaccctcgatagatcttctgttattcttttcgagaca 8358
Query: 241 ctttggacacactggaagttctccgttcttcaaacaacgtttccaatgccttgaccatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8359 ctttggacacactggaagttctccgttcttcaaacaacgtttccaatgccttgaccatga 8418
Query: 301 gaagactttgaaacactgtgtgcatgagagtgttgtcaaatctccatgtaattgtacaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8419 gaagactttgaaacactgtgtgcatgagagtgttgtcaaatctccatgtaattgtacaac 8478
Query: 361 atccaaatttttccattggatggagaatgattgakctgcatccctagattttgacatctg 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 8479 atccaaatttttccattggatggagaatgattgatctgcatccctagattttgacatctg 8538
Query: 421 taatcctaacatttcttctaacccatcaatattttgtgtgtaacaacgtaaaagtttgcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8539 taatcctaacatttcttctaacccatcaatattttgtgtgtaacaacgtaaaagtttgcc 8598
Query: 481 cctgttctttaaatgtgctataaatkcgtgcgtctttgttggtttggcttgaattgtgtg 540
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 8599 cctgttctttaaatgtgctataaattcgtgcgtctttgttggtttggcttgaattgtgtg 8658
Query: 541 tgaatatagattctccatgaatgaagcaaaaacactgattttctcttcttctcgaaatag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8659 tgaatatagattctccatgaatgaagcaaaaacactgattttctcttcttctcgaaatag 8718
Query: 601 cgatatatcaaacatatcctgtcctgacctgatattcacatcagggtattgttctttaac 660
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 8719 cgatatatcaaacatatcctgtcctgacctgatattcacatcanggtattgttctttaac 8778
Query: 661 catcctataaagaccttcaaatgac 685
||||||||| ||||||||| |||||
Sbjct: 8779 catcctatanagaccttcanatgac 8803
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7811
Number of Sequences: 1807
Number of extensions: 7811
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 970
length of database: 10,358,551
effective HSP length: 16
effective length of query: 954
effective length of database: 10,329,639
effective search space: 9854475606
effective search space used: 9854475606
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)